In Artinis NIRS blog, you will find the latest trends in (f)NIRS, NIRS studies and applications, tutor from the leaders of near infrared spectroscopy, not to mention detailed insights and tips and tricks for your research!
Search blog post topic
Beyond the Brain: Unveiling the Mind-Muscle Connection with Simultaneous NIRS
NIRS can be applied on any tissue enabling to measure brain and muscle oxygenation simultaneously. Read this blogpost to learn more about application areas employing NIRS on muscle and brain at the same time, recently published literature and solutions Artinis offers to make this possible.
Measuring brain and muscle oxygenation simultaneously using only one device
Interest and importance of simultaneously measuring brain and muscle oxygenation is increasing in various research fields. Our new device, the PortaLite MKII assessment of oxygenation of different tissues and locations by using only one device. Read more about the PortaLite MKII, application possibilities, and features in this blog post.
fNIRS analysis toolbox series – MNE/Python
In this blog post, we present MNE-NIRS, a Python toolbox for analyzing NIRS/fNIRS data, which aims at researchers with a background in engineering, neuroscience and/or AI. The toolbox is handled by scripting the processing pipeline, which can be done in a regular Python script or within a Jupyter notebook.
fNIRS analysis toolbox series – Homer
Here we present Homer3, an open-source MATLAB toolbox for analysis of fNIRS data and for creating maps of brain activation. In this blog post, we present the basic principle of Homer3 and show a simple example of how to read in data, preprocess the data (filtering only), average over trials as well as over subjects, and plot the final result in a graph.
fNIRS analysis toolbox series – FieldTrip
Here we present FieldTrip, which is a MATLAB analysis toolbox that was originally designed for electrophysiological data analysis. However, FieldTrip supports fNIRS data analysis as well. It contains high-level functions that can be combined in a MATLAB script. It aims at researchers with a background in neuroscience, engineering, optics and physics.
fNIRS analysis toolbox series – Brain AnalyzIR
Here we present the NIRS Brain AnalyzIR toolbox, a toolbox for analysis of (f)NIRS data in Matlab. NIRS Brain AnalyzIR toolbox aims at researchers with a background in neuroscience. The toolbox is suitable for researchers having basic knowledge of Matlab and especially those who are comfortable with object-oriented programming.
fNIRS analysis toolbox series – NIRSTORM
Here we present NIRSTORM, a NIRS analysis plugin for the MATLAB-based MEEG Brainstorm toolbox. It is aimed at researchers with a background in neuroscience, engineering, optics and physics. Here, we present the basic principle of NIRSTORM and show a simple example of how to go from raw data to a visualisation of the average response over trials and sessions.
fNIRS analysis toolbox series – OxySoft
OxySoft is our proprietary, and dedicated, NIRS software used to collect, store, view, and analyze all necessary data. Here, we present the basic principle of data analysis within OxySoft itself and show a simple example of how to read in data, preprocess the data (filtering only), average over trials and over subjects and plot the final result in a graph. Finally, we will show how to get the data into a format suited for statistical analysis.
fNIRS analysis toolbox series – Introduction
In the coming months, we will highlight several toolboxes that are used by fNIRS researchers. A list of available toolboxes is compiled by the society for functional Near Infrared Spectroscopy. There are many toolboxes, each with its own strengths and specializations.
Artinis Literature Overview 2019 - Brain research
We are very proud to see our equipment used in a wide range of scientific research and continue to be inspired by the bright scientists who are our customers. Perhaps the biggest takeaway from all the publications last year is the fact that NIRS is no longer navel-gazing as a research field on its own, but it has reached out and found a new audience as a versatile research application that, even more than fMRI, is being used in more and more parallel fields. Here, we highlight some of the noteworthy elements of 2019’s publications.
Artinis at the Organization for Human Brain Mapping
At the OHBM conference, we had multiple people with previous NIRS experience ask us if you could really get a good signal with a wearable device on adults. We offered them the chance to try it out themselves; a quick setup resulting in a good signal within minutes quickly dispelled their initial doubts. Seeing is believing!
Using fNIRS to study emotions in virtual reality environments
Have you ever watched a horror movie or read a really gripping thriller that made you skip a beat or two at the climax? If you know what I’m talking about, then we can agree on something: our minds are connected to our bodies in such a way that the emotions we experience cause physiological changes on us.